Michael,
I was looking at changesets and there was a just a different overload used on one method to ensure that the comments are replaces as well. You can call this method in transformation with same results(or as Joshua suggests create a custom macro method that will be used on search results):
public static string StripTags(string htmlText, bool replaceEntities, bool replaceComments, string tagReplacement, string entitiesReplacement, string commentsReplacement);